Site: EURASIP Journal on Bioinformatics and Systems Biology
- Using a State-Space Model and Location Analysis to Infer Time-Delayed Regulatory Networks
- Stochastic Simulation of Delay-Induced Circadian Rhythms in Drosophila
- Network Structure and Biological Function: Reconstruction, Modeling, and Statistical Approaches
- Reverse Engineering of Gene Regulatory Networks: A Comparative Study
- Modelling Transcriptional Regulation with a Mixture of Factor Analyzers and Variational Bayesian Expectation Maximization
- Applications of Signal Processing Techniques to Bioinformatics, Genomics, and Proteomics
- Clustering of Gene Expression Data Based on Shape Similarity
- Is Bagging Effective in the Classification of Small-Sample Genomic and Proteomic Data?
- Identifying Genes Involved in Cyclic Processes by Combining Gene Expression Analysis and Prior Knowledge
- Intervention in Context-Sensitive Probabilistic Boolean Networks Revisited
- Efficient Alignment of RNAs with Pseudoknots Using Sequence Alignment Constraints
- A Hybrid Technique for the Periodicity Characterization of Genomic Sequence Data
- Spectral Preprocessing for Clustering Time-Series Gene Expressions
- Reconstructing Generalized Logical Networks of Transcriptional Regulation in Mouse Brain from Temporal Gene Expression Data
- Functional Classification of Genome-Scale Metabolic Networks
- Adaptive Dynamics of Regulatory Networks: Size Matters
- How to Improve Postgenomic Knowledge Discovery Using Imputation
- Transition Dependency: A Gene-Gene Interaction Measure for Times Series Microarray Data
- Stability from Structure: Metabolic Networks Are Unlike Other Biological Networks
- Assessing the Exceptionality of Coloured Motifs in Networks
- Compressive Sensing DNA Microarrays
- On the Impact of Entropy Estimation on Transcriptional Regulatory Network Inference Based on Mutual Information
- A Bayesian Network View on Nested Effects Models
- The Impact of Time Delays on the Robustness of Biological Oscillators and the Effect of Bifurcations on the Inverse Problem
- Origins of Stochasticity and Burstiness in High-Dimensional Biochemical Networks
- Towards Systems Biology of Heterosis: A Hypothesis about Molecular Network Structure Applied for the Arabidopsis Metabolome
- Integrating Biosystem Models Using Waveform Relaxation
- Algorithms and Complexity Analyses for Control of Singleton Attractors in Boolean Networks
- Using Temporal Correlation in Factor Analysis for Reconstructing Transcription Factor Activities
- Inference of Boolean Networks Using Sensitivity Regularization